STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_0117Iron transport protein, putative; Protein involved in GTP binding, 1-2nm peptidoglycan-based cell wall, ferrous iron transporter activity, ferrous iron transport and integral to membrane. (566 aa)    
Predicted Functional Partners:
MCON_0352
FeoA domain protein.
 
  
 0.694
MCON_0353
FeoA family protein.
  
  
 0.611
MCON_0680
FeoA domain protein.
  
  
 0.600
MCON_3299
FeoA domain protein.
  
  
 0.600
MCON_0290
Peptidase M50, putative; Protein involved in integral to plasma membrane.
  
  
 0.523
MCON_3220
Histidine-protein kinase.
     
 0.520
MCON_2614
Transcriptional regulator, Fur family.
 
   
 0.443
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.