STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_0869Conserved domain protein. (41 aa)    
Predicted Functional Partners:
MCON_0867
Hypothetical protein.
       0.709
MCON_0868
Uncharacterized protein family (UPF0175).
       0.709
MCON_1814
Methyltransferase/glycosyl transferase fusion protein.
  
  
 0.695
epsD
NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; Protein involved in lipopolysaccharide biosynthetic process; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.594
MCON_2573
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.559
rfbB
Protein involved in dTDP-glucose 4,6-dehydratase activity.
  
  
 0.543
MCON_2574
Oxidoreductase domain protein.
  
  
 0.538
MCON_1229
Membrane protein.
  
  
 0.512
MCON_2589
Lipopolysaccharide O-side chain biosynthesis protein.
  
  
 0.512
MCON_0866
Conserved domain protein.
      
0.449
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.