STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_1080Conserved hypothetical protein. (239 aa)    
Predicted Functional Partners:
MCON_1081
hydroxymethylglutaryl-CoA synthase, putative; Protein involved in 3-oxoacyl-[acyl-carrier-protein] synthase activity and fatty acid biosynthetic process; Belongs to the thiolase-like superfamily. UPF0219 family.
 
    0.968
MCON_1083
Protein of unknown function (DUF35).
 
    0.919
MCON_1082
Thiolase, putative.
  
    0.903
MCON_3359
HMG-CoA synthase; Protein involved in hydroxymethylglutaryl-CoA synthase activity.
  
    0.693
MCON_3177
NMD3 family protein.
  
   
 0.667
MCON_1343
Radical SAM domain protein.
  
     0.666
MCON_1168
Conserved transmembrane protein (DUF373).
 
     0.664
MCON_0338
PUA domain protein.
  
     0.662
carS
Putative integral membrane protein (UPF0290); Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
     0.657
MCON_0222
Conserved hypothetical protein.
 
     0.612
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.