STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_1317Nucleotidyl transferase. (421 aa)    
Predicted Functional Partners:
MCON_0206
Ribose-1,5-bisphosphate isomerase, e2b2 family; Protein involved in intramolecular oxidoreductase activity, interconverting aldoses and ketoses and AMP metabolic process; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.815
eif2a
Translation initiation factor 2, alpha subunit.
   
 0.793
MCON_1292
Elongation factor Tu, domain 2 protein.
   
 0.727
eif2g
Protein synthesis factor, GTP-binding protein; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
   
 0.727
MCON_1814
Methyltransferase/glycosyl transferase fusion protein.
  
 
 0.673
rfbA
Protein involved in glucose-1-phosphate thymidylyltransferase activity.
 
  
0.660
asnB
Protein involved in asparagine synthase (glutamine-hydrolyzing) activity and asparagine biosynthetic process.
 
  
 0.574
rfbB
Protein involved in dTDP-glucose 4,6-dehydratase activity.
  
  
 0.564
MCON_2573
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.562
MCON_0485
dTDP-4-dehydrorhamnose 3,5-epimerase-related protein.
  
  
 0.551
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.