STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_1486Conserved hypothetical protein. (594 aa)    
Predicted Functional Partners:
MCON_1487
KaiC.
       0.777
MCON_1484
Galactose-1-phosphate uridylyltransferase, putative; Protein involved in galactose metabolic process, UDP-glucose:hexose-1-phosphate uridylyltransferase activity and UTP:galactose-1-phosphate uridylyltransferase activity.
       0.679
MCON_1485
Glycosyl transferase, group 1 family protein.
       0.610
MCON_1483
Glycosyl transferase, group 1 family protein.
 
     0.593
MCON_0894
Glycosyltransferase family 57 protein; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds.
 
     0.591
MCON_3037
Fe-S cluster domain protein.
  
     0.540
MCON_0895
Glycogen debranching enzyme, archaeal type, putative; Protein involved in glycogen debranching enzyme activity and glycogen catabolic process.
 
     0.529
rfcL
Replication factor C large subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily.
       0.444
MCON_1489
Pyridoxamine 5'-phosphate oxidase family protein.
       0.444
MCON_2099
Sodium bile acid symporter family.
  
     0.431
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.