STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accCProtein involved in acetyl-CoA carboxylase activity, biotin carboxylase activity and acetyl-CoA carboxylase complex. (496 aa)    
Predicted Functional Partners:
MCON_1491
Bifunctional protein birA; Protein involved in biotin-[acetyl-CoA-carboxylase] ligase activity.
 0.999
pycB
Protein involved in pyruvate carboxylase activity, oxaloacetate decarboxylase activity and sodium ion transporter activity.
 
 
 0.997
MCON_1918
NAD-dependent malic enzyme; Protein involved in malate dehydrogenase (oxaloacetate-decarboxylating) activity.
  
 0.930
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
 
  
 0.928
vorC
Pyruvate/ketoisovalerate oxidoreductase subunit gamma; Protein involved in pyruvate synthase activity.
    
 0.913
korB
2-oxoglutarate ferredoxin oxidoreductase beta subunit.
    
 0.913
porA
Pyruvate oxidoreductase subunit alpha.
  
 
  0.912
MCON_2658
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
  0.912
porB
Pyruvate oxidoreductase subunit beta.
    
 0.910
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
  0.909
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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