STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_1738TPR repeat protein. (344 aa)    
Predicted Functional Partners:
MCON_3529
TPR-repeat protein.
  
     0.685
MCON_2475
Hypothetical protein.
 
 0.675
MCON_3493
TPR-repeat protein.
  
     0.657
MCON_3220
Histidine-protein kinase.
 
 
 
 0.597
MCON_0414
TPR-repeat protein.
  
     0.587
dnaK
Chaperone protein DnaK; Acts as a chaperone.
  
 0.584
MCON_0203
TPR-repeat protein.
  
     0.548
MCON_1526
Glycosyl transferase, group 2 family protein.
  
 
 0.547
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
 
 0.547
MCON_0165
TPR repeat-containing protein.
  
     0.530
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.