STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_2015Conserved hypothetical protein TIGR01209. (373 aa)    
Predicted Functional Partners:
MCON_2016
CBS domain containing membrane protein.
 
     0.855
MCON_2017
CBS domain protein.
       0.818
MCON_2018
CBS domain protein.
       0.818
MCON_2014
Conserved hypothetical protein TIGR00300.
       0.773
MCON_0551
Uncharacterized protein family (UPF0278); RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
 
     0.765
MCON_2019
CBS domain pair protein.
 
     0.723
MCON_2972
Hypothetical protein; Uncharacterized ArCR, COG1810.
 
     0.563
polB2
DNA polymerase 2.
 
    0.553
MCON_1166
GXGXG motif protein.
  
     0.532
MCON_2020
CBS domain protein.
       0.518
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.