STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_3238Conserved hypothetical protein. (239 aa)    
Predicted Functional Partners:
MCON_3240
Conserved hypothetical protein.
   
 
 0.838
MCON_3242
Conserved hypothetical protein.
     
 0.628
MCON_3241
Ser/Thr protein phosphatase family protein.
     
 0.621
MCON_3239
Conserved hypothetical protein.
      
0.613
MCON_0039
Conserved hypothetical protein.
   
 
 0.594
MCON_0081
Domain of unknown function protein.
   
 
 0.588
MCON_3356
Conserved hypothetical protein.
   
 
 0.588
MCON_1677
Conserved hypothetical protein.
   
 
 0.555
MCON_2356
Phosphoesterase, RecJ domain protein.
   
    0.437
MCON_3237
Protein of unknown function (DUF20).
       0.415
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.