STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK07704.1Hypothetical protein. (499 aa)    
Predicted Functional Partners:
SDK07724.1
PmbA protein.
       0.692
SDK07764.1
Myo-inositol-1(or 4)-monophosphatase.
       0.692
SDK01872.1
Hypothetical protein.
  
     0.666
SDK93381.1
Endonuclease/Exonuclease/phosphatase family protein.
 
     0.636
SDK13377.1
Membrane associated serine protease, rhomboid family.
  
    0.631
SDJ97457.1
Uncharacterized coiled-coil protein SlyX (sensitive to lysis X).
  
     0.617
SDJ95903.1
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
  
     0.616
SDK68449.1
Cell division transport system permease protein.
  
     0.609
SDK04845.1
Hypothetical protein.
  
     0.607
SDK07798.1
Protein of unknown function.
 
     0.563
Your Current Organism:
Albidovulum xiamenense
NCBI taxonomy Id: 990712
Other names: A. xiamenense, Albidovulum sp. YBY-7, Albidovulum xiamenense Yin et al. 2012, CGMCC 1.10789, LMG 26247, LMG:26247, MCCC 1A06317, strain YBY-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.