STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK25018.1(2S)-methylsuccinyl-CoA dehydrogenase. (560 aa)    
Predicted Functional Partners:
SDK38635.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.921
SDK14726.1
Electron transfer flavoprotein alpha subunit.
 0.917
SDK27209.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.917
SDK35917.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.911
SDK76178.1
2-methylfumaryl-CoA hydratase.
  
  0.882
SDK08918.1
(2R)-ethylmalonyl-CoA mutase.
 
 
 0.828
SDK08887.1
crotonyl-CoA carboxylase/reductase.
  
  0.796
SDK14757.1
Electron transfer flavoprotein beta subunit.
 
 
 0.791
SDK77034.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.775
SDK89910.1
methylglutaconyl-CoA hydratase.
   
  0.775
Your Current Organism:
Albidovulum xiamenense
NCBI taxonomy Id: 990712
Other names: A. xiamenense, Albidovulum sp. YBY-7, Albidovulum xiamenense Yin et al. 2012, CGMCC 1.10789, LMG 26247, LMG:26247, MCCC 1A06317, strain YBY-7
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