STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK55800.1Indolepyruvate ferredoxin oxidoreductase. (1134 aa)    
Predicted Functional Partners:
SDK83201.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.969
SDK48527.1
Tricarballylate dehydrogenase.
  
 0.963
SDK76270.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.963
SDK98538.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 
 0.953
SDK61305.1
Cytochrome b subunit of the bc complex.
  
 
 0.951
SDK09751.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.928
SDJ98377.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.925
SDK72482.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.925
SDK00894.1
Formate dehydrogenase.
    
 0.924
SDK08918.1
(2R)-ethylmalonyl-CoA mutase.
    
 0.912
Your Current Organism:
Albidovulum xiamenense
NCBI taxonomy Id: 990712
Other names: A. xiamenense, Albidovulum sp. YBY-7, Albidovulum xiamenense Yin et al. 2012, CGMCC 1.10789, LMG 26247, LMG:26247, MCCC 1A06317, strain YBY-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.