STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK68103.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (328 aa)    
Predicted Functional Partners:
SDK68076.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.991
SDK05127.1
UDPglucose 6-dehydrogenase.
  
 
 0.900
SDK68123.1
Glycosyl transferases group 1.
    
 0.886
SDK33563.1
UDP-sulfoquinovose synthase.
  
 0.862
SDK33619.1
Nucleoside-diphosphate-sugar epimerase.
  
 0.862
SDK06673.1
Aldose 1-epimerase.
 
 
 0.779
SDK06884.1
UDP-glucuronate 4-epimerase.
 
0.726
SDK68147.1
Glycosyl transferase family 2.
     
 0.713
fcl
GDPmannose 4,6-dehydratase/GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
0.708
SDK68167.1
Core-2/I-Branching enzyme.
       0.707
Your Current Organism:
Albidovulum xiamenense
NCBI taxonomy Id: 990712
Other names: A. xiamenense, Albidovulum sp. YBY-7, Albidovulum xiamenense Yin et al. 2012, CGMCC 1.10789, LMG 26247, LMG:26247, MCCC 1A06317, strain YBY-7
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