STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL12747.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
SDL12721.1
Hypothetical protein.
 
     0.949
SDL12687.1
Predicted phage recombinase, RecA/RadA family.
 
     0.847
SDL12501.1
Protein of unknown function.
 
     0.819
SDL12581.1
Phage terminase, large subunit GpA.
 
     0.819
SDL12550.1
Hypothetical protein.
 
     0.815
SDL04536.1
Hypothetical protein.
 
     0.784
SDL12660.1
Hypothetical protein.
 
     0.780
SDK69236.1
Hypothetical protein.
 
     0.778
SDL04381.1
Hypothetical protein.
 
     0.778
SDL10626.1
Hypothetical protein.
 
     0.778
Your Current Organism:
Albidovulum xiamenense
NCBI taxonomy Id: 990712
Other names: A. xiamenense, Albidovulum sp. YBY-7, Albidovulum xiamenense Yin et al. 2012, CGMCC 1.10789, LMG 26247, LMG:26247, MCCC 1A06317, strain YBY-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.