Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
IW20_19290 | IW20_20745 | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
IW20_20735 | IW20_20740 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
IW20_20735 | IW20_20745 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
IW20_20735 | IW20_20750 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
IW20_20740 | IW20_20735 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.884 |
IW20_20740 | IW20_20745 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
IW20_20745 | IW20_19290 | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.465 |
IW20_20745 | IW20_20735 | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.505 |
IW20_20745 | IW20_20740 | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
IW20_20745 | IW20_20750 | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |
IW20_20750 | IW20_20735 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.433 |
IW20_20750 | IW20_20745 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |