STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDM1RAD52 motif containing 1. (285 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
      
 0.626
ASB8
Ankyrin repeat and SOCS box protein 8; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins; Belongs to the ankyrin SOCS box (ASB) family.
      
 0.625
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.621
RAD52
RAD52 homolog, DNA repair protein.
    
 
 0.613
KHNYN
KH and NYN domain containing.
      
 0.540
CTIF
Cap binding complex dependent translation initiation factor.
   
  
 0.530
FAM111B
Family with sequence similarity 111 member B.
      
 0.506
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
  
 0.484
PABPC1L
Poly(A) binding protein cytoplasmic 1 like.
      
 0.482
BEND7
BEN domain containing 7.
      
 0.480
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.