STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDFPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. (250 aa)    
Predicted Functional Partners:
MTFMT
Methionyl-tRNA formyltransferase, mitochondrial; Formylates methionyl-tRNA in mitochondria. A single tRNA(Met) gene gives rise to both an initiator and an elongator species via an unknown mechanism; Belongs to the Fmt family.
  
 
 0.923
MRPL21
39S ribosomal protein L21, mitochondrial; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.904
MRPL20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.892
MRPL27
39S ribosomal protein L27, mitochondrial; Belongs to the bacterial ribosomal protein bL27 family.
  
   0.881
MRPL9
39S ribosomal protein L9, mitochondrial.
  
 
 0.873
MRPS6
28S ribosomal protein S6, mitochondrial; Belongs to the bacterial ribosomal protein bS6 family.
   
   0.871
MRPS9
28S ribosomal protein S9, mitochondrial.
  
   0.866
MRPL19
39S ribosomal protein L19, mitochondrial; Belongs to the bacterial ribosomal protein bL19 family.
  
   0.863
RPS9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
   0.856
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.855
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.