STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TULP2Tubby-like protein; Belongs to the TUB family. (509 aa)    
Predicted Functional Partners:
WDR19
WD repeat domain 19.
    
 
 0.742
IFT122
Intraflagellar transport 122.
   
 
 0.714
CRISPLD2
Cysteine-rich secretory protein LCCL domain-containing 2; Promotes matrix assembly.
      
 0.672
PLSCR3
Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family.
      
 0.669
CCDC18
Coiled-coil domain containing 18.
      
 0.659
SSX5
Synovial sarcoma, X breakpoint 5.
      
 0.651
KCTD4
BTB/POZ domain-containing protein KCTD4.
      
 0.639
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
      
 0.635
IFT140
Intraflagellar transport 140.
    
 
 0.622
ZNF165
Zinc finger protein 165.
    
 
 0.584
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.