STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRTNVertnin; Belongs to the vertnin family. (700 aa)    
Predicted Functional Partners:
PROX2
Prospero homeobox 2.
      
 0.830
SYNDIG1L
Synapse differentiation-inducing gene protein 1-like.
   
  
 0.796
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.716
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.688
WDR92
WD repeat-containing protein 92; Seems to act as a modulator of apoptosis.
    
 
 0.677
ZSCAN10
Zinc finger and SCAN domain containing 10.
   
 
 0.669
ZNF614
Zinc finger protein 614.
    
 
 0.663
ABCD4
ATP binding cassette subfamily D member 4.
      
 0.662
PROKR1
Prokineticin receptor 1; Receptor for prokineticin 1. Exclusively coupled to the G(q) subclass of heteromeric G proteins. Activation leads to mobilization of calcium, stimulation of phosphoinositide turnover and activation of p44/p42 mitogen-activated protein kinase. May play a role during early pregnancy (By similarity).
      
 0.610
PDIA4
Protein disulfide-isomerase A4.
      
 0.608
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.