STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAC1Placenta enriched 1. (179 aa)    
Predicted Functional Partners:
FAM122B
Family with sequence similarity 122B.
      
 0.655
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
   0.599
TECTA
Tectorin alpha.
      
 0.565
PEG10
CCHC-type domain-containing protein.
      
 0.550
EPC2
Enhancer of polycomb homolog.
    
   0.536
BRD8
Bromodomain containing 8.
    
   0.536
EP400
E1A binding protein p400.
    
   0.535
MBTD1
Mbt domain containing 1.
    
   0.534
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
    
   0.533
ING3
Inhibitor of growth protein.
    
   0.532
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.