STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM6RNA binding motif protein 6. (1120 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
 
 0.813
RBM39
RNA binding motif protein 39.
   
 
 0.807
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.766
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.692
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.670
SF3A3
Splicing factor 3a, subunit 3, 60kDa.
   
 
 0.665
WDR83
Mitogen-activated protein kinase organizer 1.
      
 0.649
ERI2
Exonuclease domain-containing protein.
   
  
 0.646
DDX10
RNA helicase.
    
 
 0.644
RBM17
RNA binding motif protein 17.
   
 
 0.618
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.