STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBX2Homeobox protein DBX2. (340 aa)    
Predicted Functional Partners:
MRO
Protein maestro.
      
 0.732
IRX3
Iroquois homeobox 3.
    
 
 0.722
LHX5
LIM homeobox 5.
    
 
 0.663
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.614
BHLHE23
Basic helix-loop-helix family member e23.
   
  
 0.582
OLIG2
Oligodendrocyte transcription factor 2.
   
  
 0.580
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
  
 0.498
TMEM117
Transmembrane protein 117.
      
 0.495
FOXA2
Forkhead box A2.
      
 0.491
ANO6
Anoctamin.
   
  
 0.488
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.