Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E2F4 | LEF1 | ENSBTAP00000015999 | ENSBTAP00000061494 | E2F transcription factor 4. | Lymphoid enhancer binding factor 1. | 0.438 |
E2F4 | SMAD2 | ENSBTAP00000015999 | ENSBTAP00000017649 | E2F transcription factor 4. | Mothers against decapentaplegic homolog 2; Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD2/SMAD4 complex, activates transcription. May act as a tumor suppressor in colorectal carcinoma. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator [...] | 0.940 |
E2F4 | SMAD3 | ENSBTAP00000015999 | ENSBTAP00000016728 | E2F transcription factor 4. | Mothers against decapentaplegic homolog. | 0.984 |
E2F4 | SMAD4 | ENSBTAP00000015999 | ENSBTAP00000009081 | E2F transcription factor 4. | Mothers against decapentaplegic homolog 4; Common SMAD (co-SMAD) is the coactivator and mediator of signal transduction by TGF-beta (transforming growth factor). Component of the heterotrimeric SMAD2/SMAD3-SMAD4 complex that forms in the nucleus and is required for the TGF-mediated signaling. Promotes binding of the SMAD2/SMAD4/FAST-1 complex to DNA and provides an activation function required for SMAD1 or SMAD2 to stimulate transcription. Component of the multimeric SMAD3/SMAD4/JUN/FOS complex which forms at the AP1 promoter site; required for synergistic transcriptional activity in r [...] | 0.978 |
LEF1 | E2F4 | ENSBTAP00000061494 | ENSBTAP00000015999 | Lymphoid enhancer binding factor 1. | E2F transcription factor 4. | 0.438 |
LEF1 | SMAD2 | ENSBTAP00000061494 | ENSBTAP00000017649 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog 2; Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD2/SMAD4 complex, activates transcription. May act as a tumor suppressor in colorectal carcinoma. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator [...] | 0.750 |
LEF1 | SMAD3 | ENSBTAP00000061494 | ENSBTAP00000016728 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog. | 0.845 |
LEF1 | SMAD4 | ENSBTAP00000061494 | ENSBTAP00000009081 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog 4; Common SMAD (co-SMAD) is the coactivator and mediator of signal transduction by TGF-beta (transforming growth factor). Component of the heterotrimeric SMAD2/SMAD3-SMAD4 complex that forms in the nucleus and is required for the TGF-mediated signaling. Promotes binding of the SMAD2/SMAD4/FAST-1 complex to DNA and provides an activation function required for SMAD1 or SMAD2 to stimulate transcription. Component of the multimeric SMAD3/SMAD4/JUN/FOS complex which forms at the AP1 promoter site; required for synergistic transcriptional activity in r [...] | 0.997 |
SKI | SKIL | ENSBTAP00000053695 | ENSBTAP00000005438 | SKI proto-oncogene. | SKI like proto-oncogene. | 0.613 |
SKI | SMAD1 | ENSBTAP00000053695 | ENSBTAP00000074456 | SKI proto-oncogene. | Mothers against decapentaplegic homolog 1; Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD1 is a receptor- regulated SMAD (R-SMAD). May act synergistically with SMAD4 and YY1 in bone morphogenetic protein (BMP)-mediated cardiac-specific gene expression; Belongs to the dwarfin/SMAD family. | 0.842 |
SKI | SMAD2 | ENSBTAP00000053695 | ENSBTAP00000017649 | SKI proto-oncogene. | Mothers against decapentaplegic homolog 2; Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD2/SMAD4 complex, activates transcription. May act as a tumor suppressor in colorectal carcinoma. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator [...] | 0.902 |
SKI | SMAD3 | ENSBTAP00000053695 | ENSBTAP00000016728 | SKI proto-oncogene. | Mothers against decapentaplegic homolog. | 0.908 |
SKI | SMAD4 | ENSBTAP00000053695 | ENSBTAP00000009081 | SKI proto-oncogene. | Mothers against decapentaplegic homolog 4; Common SMAD (co-SMAD) is the coactivator and mediator of signal transduction by TGF-beta (transforming growth factor). Component of the heterotrimeric SMAD2/SMAD3-SMAD4 complex that forms in the nucleus and is required for the TGF-mediated signaling. Promotes binding of the SMAD2/SMAD4/FAST-1 complex to DNA and provides an activation function required for SMAD1 or SMAD2 to stimulate transcription. Component of the multimeric SMAD3/SMAD4/JUN/FOS complex which forms at the AP1 promoter site; required for synergistic transcriptional activity in r [...] | 0.975 |
SKI | SMAD5 | ENSBTAP00000053695 | ENSBTAP00000064729 | SKI proto-oncogene. | Mothers against decapentaplegic homolog. | 0.844 |
SKIL | SKI | ENSBTAP00000005438 | ENSBTAP00000053695 | SKI like proto-oncogene. | SKI proto-oncogene. | 0.613 |
SKIL | SMAD1 | ENSBTAP00000005438 | ENSBTAP00000074456 | SKI like proto-oncogene. | Mothers against decapentaplegic homolog 1; Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD1 is a receptor- regulated SMAD (R-SMAD). May act synergistically with SMAD4 and YY1 in bone morphogenetic protein (BMP)-mediated cardiac-specific gene expression; Belongs to the dwarfin/SMAD family. | 0.606 |
SKIL | SMAD2 | ENSBTAP00000005438 | ENSBTAP00000017649 | SKI like proto-oncogene. | Mothers against decapentaplegic homolog 2; Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD2/SMAD4 complex, activates transcription. May act as a tumor suppressor in colorectal carcinoma. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator [...] | 0.880 |
SKIL | SMAD3 | ENSBTAP00000005438 | ENSBTAP00000016728 | SKI like proto-oncogene. | Mothers against decapentaplegic homolog. | 0.888 |
SKIL | SMAD4 | ENSBTAP00000005438 | ENSBTAP00000009081 | SKI like proto-oncogene. | Mothers against decapentaplegic homolog 4; Common SMAD (co-SMAD) is the coactivator and mediator of signal transduction by TGF-beta (transforming growth factor). Component of the heterotrimeric SMAD2/SMAD3-SMAD4 complex that forms in the nucleus and is required for the TGF-mediated signaling. Promotes binding of the SMAD2/SMAD4/FAST-1 complex to DNA and provides an activation function required for SMAD1 or SMAD2 to stimulate transcription. Component of the multimeric SMAD3/SMAD4/JUN/FOS complex which forms at the AP1 promoter site; required for synergistic transcriptional activity in r [...] | 0.953 |
SKIL | SMAD5 | ENSBTAP00000005438 | ENSBTAP00000064729 | SKI like proto-oncogene. | Mothers against decapentaplegic homolog. | 0.710 |
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