Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA1 | GATA2 | ENSBTAP00000004135 | ENSBTAP00000066251 | GATA binding protein 1. | GATA binding protein 2. | 0.530 |
GATA1 | GFI1B | ENSBTAP00000004135 | ENSBTAP00000016974 | GATA binding protein 1. | Growth factor independent 1B transcriptional repressor. | 0.850 |
GATA1 | LDB1 | ENSBTAP00000004135 | ENSBTAP00000062528 | GATA binding protein 1. | LIM domain binding 1. | 0.991 |
GATA1 | LMO2 | ENSBTAP00000004135 | ENSBTAP00000009126 | GATA binding protein 1. | Rhombotin-2; Acts with TAL1/SCL to regulate red blood cell development. Also acts with LDB1 to maintain erythroid precursors in an immature state. | 0.997 |
GATA1 | LYL1 | ENSBTAP00000004135 | ENSBTAP00000069599 | GATA binding protein 1. | LYL1 basic helix-loop-helix family member. | 0.564 |
GATA1 | RUNX1 | ENSBTAP00000004135 | ENSBTAP00000006224 | GATA binding protein 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.944 |
GATA1 | TAL1 | ENSBTAP00000004135 | ENSBTAP00000061258 | GATA binding protein 1. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.997 |
GATA1 | TCF12 | ENSBTAP00000004135 | ENSBTAP00000035793 | GATA binding protein 1. | Transcription factor 12. | 0.613 |
GATA1 | TCF3 | ENSBTAP00000004135 | ENSBTAP00000057296 | GATA binding protein 1. | Transcription factor 3. | 0.694 |
GATA2 | GATA1 | ENSBTAP00000066251 | ENSBTAP00000004135 | GATA binding protein 2. | GATA binding protein 1. | 0.530 |
GATA2 | GFI1B | ENSBTAP00000066251 | ENSBTAP00000016974 | GATA binding protein 2. | Growth factor independent 1B transcriptional repressor. | 0.684 |
GATA2 | LDB1 | ENSBTAP00000066251 | ENSBTAP00000062528 | GATA binding protein 2. | LIM domain binding 1. | 0.897 |
GATA2 | LMO2 | ENSBTAP00000066251 | ENSBTAP00000009126 | GATA binding protein 2. | Rhombotin-2; Acts with TAL1/SCL to regulate red blood cell development. Also acts with LDB1 to maintain erythroid precursors in an immature state. | 0.943 |
GATA2 | LYL1 | ENSBTAP00000066251 | ENSBTAP00000069599 | GATA binding protein 2. | LYL1 basic helix-loop-helix family member. | 0.685 |
GATA2 | RUNX1 | ENSBTAP00000066251 | ENSBTAP00000006224 | GATA binding protein 2. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.921 |
GATA2 | TAL1 | ENSBTAP00000066251 | ENSBTAP00000061258 | GATA binding protein 2. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.951 |
GATA2 | TAL2 | ENSBTAP00000066251 | ENSBTAP00000055139 | GATA binding protein 2. | TAL bHLH transcription factor 2. | 0.527 |
GATA2 | TCF12 | ENSBTAP00000066251 | ENSBTAP00000035793 | GATA binding protein 2. | Transcription factor 12. | 0.634 |
GATA2 | TCF3 | ENSBTAP00000066251 | ENSBTAP00000057296 | GATA binding protein 2. | Transcription factor 3. | 0.613 |
GFI1B | GATA1 | ENSBTAP00000016974 | ENSBTAP00000004135 | Growth factor independent 1B transcriptional repressor. | GATA binding protein 1. | 0.850 |
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