STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF6C1q and TNF related 6. (270 aa)    
Predicted Functional Partners:
PLAC9
Placenta-specific protein 9.
   
  
 0.712
ZSCAN12
Zinc finger and SCAN domain containing 12.
      
 0.569
MYCBPAP
MYCBP associated protein.
      
 0.547
ISLR
Immunoglobulin superfamily containing leucine-rich repeat protein.
   
  
 0.546
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.542
SERPINA11
Serpin family A member 11; Belongs to the serpin family.
      
 0.499
DUSP28
Dual specificity phosphatase 28.
      
 0.481
PTPN22
Protein tyrosine phosphatase non-receptor type 22.
      
 0.480
MS4A2
Membrane spanning 4-domains A2.
      
 0.479
BACH2
BTB domain and CNC homolog 2.
      
 0.475
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.