Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | B3GAT2 | ENSBTAP00000060572 | ENSBTAP00000066649 | Agrin. | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | 0.400 |
AGRN | EXT1 | ENSBTAP00000060572 | ENSBTAP00000008154 | Agrin. | Exostosin-1; Glycosyltransferase required for the biosynthesis of heparan- sulfate. The EXT1/EXT2 complex possesses substantially higher glycosyltransferase activity than EXT1 or EXT2 alone. Required for the exosomal release of SDCBP, CD63 and syndecan (By similarity). | 0.697 |
AGRN | GPC2 | ENSBTAP00000060572 | ENSBTAP00000011679 | Agrin. | Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.766 |
AGRN | HS6ST2 | ENSBTAP00000060572 | ENSBTAP00000063157 | Agrin. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.537 |
AGRN | HS6ST3 | ENSBTAP00000060572 | ENSBTAP00000048528 | Agrin. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.522 |
AGRN | NDST2 | ENSBTAP00000060572 | ENSBTAP00000016827 | Agrin. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2; Essential bifunctional enzyme that catalyzes both the N- deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA disaccharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis. Plays a role in determining the extent and pattern of sulfation of heparan sulfate. Required for the exosomal release of SDCBP, CD63 and syndecan (By similarity). | 0.595 |
AGRN | SDC1 | ENSBTAP00000060572 | ENSBTAP00000072853 | Agrin. | Syndecan-1; Cell surface proteoglycan that bears both heparan sulfate and chondroitin sulfate and that links the cytoskeleton to the interstitial matrix. Regulates exosome biogenesis in concert with SDCBP and PDCD6IP. | 0.726 |
AGRN | SDC2 | ENSBTAP00000060572 | ENSBTAP00000071799 | Agrin. | Syndecan-2; Cell surface proteoglycan that bears heparan sulfate. Regulates dendritic arbor morphogenesis (By similarity). | 0.656 |
AGRN | SDC3 | ENSBTAP00000060572 | ENSBTAP00000065590 | Agrin. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.731 |
AGRN | SDC4 | ENSBTAP00000060572 | ENSBTAP00000020125 | Agrin. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.687 |
B3GAT2 | AGRN | ENSBTAP00000066649 | ENSBTAP00000060572 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Agrin. | 0.400 |
B3GAT2 | GPC2 | ENSBTAP00000066649 | ENSBTAP00000011679 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.671 |
B3GAT2 | HS6ST2 | ENSBTAP00000066649 | ENSBTAP00000063157 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.428 |
B3GAT2 | SDC1 | ENSBTAP00000066649 | ENSBTAP00000072853 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Syndecan-1; Cell surface proteoglycan that bears both heparan sulfate and chondroitin sulfate and that links the cytoskeleton to the interstitial matrix. Regulates exosome biogenesis in concert with SDCBP and PDCD6IP. | 0.426 |
B3GAT2 | SDC2 | ENSBTAP00000066649 | ENSBTAP00000071799 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Syndecan-2; Cell surface proteoglycan that bears heparan sulfate. Regulates dendritic arbor morphogenesis (By similarity). | 0.489 |
B3GAT2 | SDC3 | ENSBTAP00000066649 | ENSBTAP00000065590 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.471 |
B3GAT2 | SDC4 | ENSBTAP00000066649 | ENSBTAP00000020125 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.400 |
EXT1 | AGRN | ENSBTAP00000008154 | ENSBTAP00000060572 | Exostosin-1; Glycosyltransferase required for the biosynthesis of heparan- sulfate. The EXT1/EXT2 complex possesses substantially higher glycosyltransferase activity than EXT1 or EXT2 alone. Required for the exosomal release of SDCBP, CD63 and syndecan (By similarity). | Agrin. | 0.697 |
EXT1 | GPC2 | ENSBTAP00000008154 | ENSBTAP00000011679 | Exostosin-1; Glycosyltransferase required for the biosynthesis of heparan- sulfate. The EXT1/EXT2 complex possesses substantially higher glycosyltransferase activity than EXT1 or EXT2 alone. Required for the exosomal release of SDCBP, CD63 and syndecan (By similarity). | Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.669 |
EXT1 | HS6ST2 | ENSBTAP00000008154 | ENSBTAP00000063157 | Exostosin-1; Glycosyltransferase required for the biosynthesis of heparan- sulfate. The EXT1/EXT2 complex possesses substantially higher glycosyltransferase activity than EXT1 or EXT2 alone. Required for the exosomal release of SDCBP, CD63 and syndecan (By similarity). | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.635 |
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