Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATL1 | REEP4 | ENSBTAP00000019032 | ENSBTAP00000068957 | Atlastin-1; GTPase tethering membranes through formation of trans- homooligomers and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis. May also regulate Golgi biogenesis. May regulate axonal development. | Receptor expression-enhancing protein 4; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family. | 0.767 |
ATL1 | RTN2 | ENSBTAP00000019032 | ENSBTAP00000010770 | Atlastin-1; GTPase tethering membranes through formation of trans- homooligomers and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis. May also regulate Golgi biogenesis. May regulate axonal development. | Reticulon. | 0.916 |
ATL1 | RTN4 | ENSBTAP00000019032 | ENSBTAP00000014745 | Atlastin-1; GTPase tethering membranes through formation of trans- homooligomers and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis. May also regulate Golgi biogenesis. May regulate axonal development. | Reticulon. | 0.807 |
ATL3 | REEP4 | ENSBTAP00000043475 | ENSBTAP00000068957 | Atlastin GTPase 3. | Receptor expression-enhancing protein 4; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family. | 0.740 |
ATL3 | RTN2 | ENSBTAP00000043475 | ENSBTAP00000010770 | Atlastin GTPase 3. | Reticulon. | 0.831 |
ATL3 | RTN4 | ENSBTAP00000043475 | ENSBTAP00000014745 | Atlastin GTPase 3. | Reticulon. | 0.830 |
CCDC34 | CCDC77 | ENSBTAP00000028456 | ENSBTAP00000058436 | Coiled-coil domain containing 34. | Coiled-coil domain containing 77. | 0.746 |
CCDC34 | CEP85 | ENSBTAP00000028456 | ENSBTAP00000012597 | Coiled-coil domain containing 34. | Centrosomal protein 85. | 0.705 |
CCDC34 | FIGNL1 | ENSBTAP00000028456 | ENSBTAP00000001962 | Coiled-coil domain containing 34. | Fidgetin like 1; Belongs to the AAA ATPase family. | 0.732 |
CCDC34 | NEMP1 | ENSBTAP00000028456 | ENSBTAP00000019519 | Coiled-coil domain containing 34. | Nuclear envelope integral membrane protein 1; Belongs to the NEMP family. | 0.803 |
CCDC34 | REEP4 | ENSBTAP00000028456 | ENSBTAP00000068957 | Coiled-coil domain containing 34. | Receptor expression-enhancing protein 4; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family. | 0.691 |
CCDC34 | RIBC2 | ENSBTAP00000028456 | ENSBTAP00000004671 | Coiled-coil domain containing 34. | RIB43A-like with coiled-coils protein 2; Belongs to the RIB43A family. | 0.775 |
CCDC77 | CCDC34 | ENSBTAP00000058436 | ENSBTAP00000028456 | Coiled-coil domain containing 77. | Coiled-coil domain containing 34. | 0.746 |
CCDC77 | CEP85 | ENSBTAP00000058436 | ENSBTAP00000012597 | Coiled-coil domain containing 77. | Centrosomal protein 85. | 0.750 |
CCDC77 | FIGNL1 | ENSBTAP00000058436 | ENSBTAP00000001962 | Coiled-coil domain containing 77. | Fidgetin like 1; Belongs to the AAA ATPase family. | 0.707 |
CCDC77 | NEMP1 | ENSBTAP00000058436 | ENSBTAP00000019519 | Coiled-coil domain containing 77. | Nuclear envelope integral membrane protein 1; Belongs to the NEMP family. | 0.824 |
CCDC77 | REEP4 | ENSBTAP00000058436 | ENSBTAP00000068957 | Coiled-coil domain containing 77. | Receptor expression-enhancing protein 4; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family. | 0.691 |
CCDC77 | RIBC2 | ENSBTAP00000058436 | ENSBTAP00000004671 | Coiled-coil domain containing 77. | RIB43A-like with coiled-coils protein 2; Belongs to the RIB43A family. | 0.756 |
CEP85 | CCDC34 | ENSBTAP00000012597 | ENSBTAP00000028456 | Centrosomal protein 85. | Coiled-coil domain containing 34. | 0.705 |
CEP85 | CCDC77 | ENSBTAP00000012597 | ENSBTAP00000058436 | Centrosomal protein 85. | Coiled-coil domain containing 77. | 0.750 |
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