STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONRF1LON peptidase N-terminal domain and ring finger 1. (416 aa)    
Predicted Functional Partners:
PGM2
Phosphoglucomutase 2.
   
  
 0.710
LSM1
U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated (By similarity). Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation (By similarity).
      
 0.676
SERTAD1
SERTA domain containing 1.
      
 0.674
DOC2B
Double C2-like domain-containing protein.
   
  
 0.666
SMCO4
Single-pass membrane and coiled-coil domain-containing protein 4.
      
 0.631
CDK17
Cyclin dependent kinase 17.
   
  
 0.630
ADRA1D
Adrenoceptor alpha 1D.
      
 0.629
TMEM205
Transmembrane protein 205.
      
 0.623
AHSA1
AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (Yeast).
      
 0.607
TM6SF1
Transmembrane 6 superfamily member 1; May function as sterol isomerase. Belongs to the TM6SF family.
      
 0.606
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.