STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC1Tetratricopeptide repeat protein 1. (292 aa)    
Predicted Functional Partners:
VWA3B
Von Willebrand factor A domain containing 3B.
      
 0.662
PPP1R7
Protein phosphatase 1 regulatory subunit 7; Regulatory subunit of protein phosphatase 1. Inactivates the PPP1CC isoform 2 during epididymal sperm maturation. Belongs to the SDS22 family.
   
    0.648
RBM12
RNA binding motif protein 12.
      
 0.642
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.624
RTN4IP1
Reticulon-4-interacting protein 1, mitochondrial; Plays a role in the regulation of retinal ganglion cell (RGC) neurite outgrowth, and hence in the development of the inner retina and optic nerve. Appears to be a potent inhibitor of regeneration following spinal cord injury.
    
 
 0.603
MRPL50
39S ribosomal protein L50, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL50 family.
   
  
 0.573
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.562
ENOX2
Ecto-NOX disulfide-thiol exchanger 2.
      
 0.547
RNF41
Ring finger protein 41.
    
   0.535
BTBD9
BTB/POZ domain-containing protein 9.
      
 0.531
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.