STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC136Coiled-coil domain containing 136. (1201 aa)    
Predicted Functional Partners:
NT5C1B
Uncharacterized protein.
    
 
 0.684
FAM71B
Family with sequence similarity 71 member B.
      
 0.684
FAM205A
Uncharacterized protein.
      
 0.672
CCDC7
Uncharacterized protein.
    
 
 0.665
ALMS1
ALMS1 centrosome and basal body associated protein.
  
 
 
 0.634
FSIP2
Fibrous sheath interacting protein 2.
  
 
 
 0.629
DHRS7B
Dehydrogenase/reductase SDR family member 7B; Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.615
CCDC114
Coiled-coil domain containing 114.
    
 
 0.609
CCDC151
Coiled-coil domain-containing protein 151; Ciliary protein involved in outer dynein arm assembly and required for motile cilia function.
    
 
 0.601
PROCA1
Protein PROCA1; Belongs to the PROCA1 family.
    
 
 0.598
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.