STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF39Rho guanine nucleotide exchange factor 39; Promotes cell proliferation. (335 aa)    
Predicted Functional Partners:
ARHGEF9
Rho guanine nucleotide exchange factor 9; Acts as guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters (By similarity).
    
 
 0.757
CCDC107
Coiled-coil domain-containing protein 107.
      
 0.685
ARHGEF37
Rho guanine nucleotide exchange factor 37.
    
 
 0.684
LRP3
LDL receptor related protein 3.
   
  
 0.675
ABLIM2
Actin binding LIM protein family member 2.
      
 0.651
ARHGEF19
Rho guanine nucleotide exchange factor 19.
      
 0.644
MPP3
Membrane palmitoylated protein 3; Belongs to the MAGUK family.
      
 0.623
CBFA2T3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
      
 0.623
SDCBP2
Syndecan binding protein 2.
      
 0.612
ABLIM3
Actin binding LIM protein family member 3.
      
 0.603
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.