Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXIN2 | CDX1 | ENSBTAP00000040177 | ENSBTAP00000015934 | Axin 2. | CDX1 protein. | 0.585 |
AXIN2 | LEF1 | ENSBTAP00000040177 | ENSBTAP00000061494 | Axin 2. | Lymphoid enhancer binding factor 1. | 0.992 |
AXIN2 | POU5F1 | ENSBTAP00000040177 | ENSBTAP00000028122 | Axin 2. | POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency (By similarity). Belongs to the POU transcription factor family. Class-5 subfamily. | 0.483 |
CDH17 | CDX1 | ENSBTAP00000043215 | ENSBTAP00000015934 | CDH17 protein. | CDX1 protein. | 0.625 |
CDX1 | AXIN2 | ENSBTAP00000015934 | ENSBTAP00000040177 | CDX1 protein. | Axin 2. | 0.585 |
CDX1 | CDH17 | ENSBTAP00000015934 | ENSBTAP00000043215 | CDX1 protein. | CDH17 protein. | 0.625 |
CDX1 | EPC2 | ENSBTAP00000015934 | ENSBTAP00000024730 | CDX1 protein. | Enhancer of polycomb homolog. | 0.573 |
CDX1 | FANCD2OS | ENSBTAP00000015934 | ENSBTAP00000013313 | CDX1 protein. | FANCD2 opposite strand protein. | 0.568 |
CDX1 | KHDC3L | ENSBTAP00000015934 | ENSBTAP00000070542 | CDX1 protein. | KH domain containing 3 like, subcortical maternal complex member. | 0.481 |
CDX1 | LEF1 | ENSBTAP00000015934 | ENSBTAP00000061494 | CDX1 protein. | Lymphoid enhancer binding factor 1. | 0.646 |
CDX1 | POU5F1 | ENSBTAP00000015934 | ENSBTAP00000028122 | CDX1 protein. | POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency (By similarity). Belongs to the POU transcription factor family. Class-5 subfamily. | 0.480 |
CDX1 | REG4 | ENSBTAP00000015934 | ENSBTAP00000043040 | CDX1 protein. | Regenerating islet-derived family, member 4. | 0.531 |
CDX1 | TBX6 | ENSBTAP00000015934 | ENSBTAP00000011919 | CDX1 protein. | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.495 |
CDX1 | TFF3 | ENSBTAP00000015934 | ENSBTAP00000028349 | CDX1 protein. | Trefoil factor 3; Involved in the maintenance and repair of the intestinal mucosa. Promotes the mobility of epithelial cells in healing processes (motogen) (By similarity). | 0.598 |
EPC2 | CDX1 | ENSBTAP00000024730 | ENSBTAP00000015934 | Enhancer of polycomb homolog. | CDX1 protein. | 0.573 |
FANCD2OS | CDX1 | ENSBTAP00000013313 | ENSBTAP00000015934 | FANCD2 opposite strand protein. | CDX1 protein. | 0.568 |
KHDC3L | CDX1 | ENSBTAP00000070542 | ENSBTAP00000015934 | KH domain containing 3 like, subcortical maternal complex member. | CDX1 protein. | 0.481 |
LEF1 | AXIN2 | ENSBTAP00000061494 | ENSBTAP00000040177 | Lymphoid enhancer binding factor 1. | Axin 2. | 0.992 |
LEF1 | CDX1 | ENSBTAP00000061494 | ENSBTAP00000015934 | Lymphoid enhancer binding factor 1. | CDX1 protein. | 0.646 |
LEF1 | POU5F1 | ENSBTAP00000061494 | ENSBTAP00000028122 | Lymphoid enhancer binding factor 1. | POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency (By similarity). Belongs to the POU transcription factor family. Class-5 subfamily. | 0.567 |
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