STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFAND6AN1-type zinc finger protein 6. (208 aa)    
Predicted Functional Partners:
CTDSP2
CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2.
   
 
 0.699
LYPLA2
Lysophospholipase II.
   
  
 0.681
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
      
 0.676
ZFAND1
Zinc finger AN1-type containing 1.
      
 0.657
PEX6
Peroxisomal biogenesis factor 6.
     
 0.645
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.638
UBA52
Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...]
    
 0.617
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
      
 0.603
RBM6
RNA binding motif protein 6.
      
 0.602
RNF115
Ring finger protein 115.
   
  
 0.588
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.