Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD274 | CD4 | ENSBTAP00000008067 | ENSBTAP00000037566 | Programmed cell death-ligand 1. | CD4 molecule. | 0.943 |
CD274 | CD80 | ENSBTAP00000008067 | ENSBTAP00000070219 | Programmed cell death-ligand 1. | CD80 molecule. | 0.999 |
CD274 | CD86 | ENSBTAP00000008067 | ENSBTAP00000071927 | Programmed cell death-ligand 1. | CD86 molecule. | 0.761 |
CD274 | CTLA4 | ENSBTAP00000008067 | ENSBTAP00000017527 | Programmed cell death-ligand 1. | Cytotoxic T-lymphocyte-associated protein 4. | 0.988 |
CD274 | FOXP3 | ENSBTAP00000008067 | ENSBTAP00000064761 | Programmed cell death-ligand 1. | Forkhead box P3. | 0.866 |
CD274 | ICOS | ENSBTAP00000008067 | ENSBTAP00000028775 | Programmed cell death-ligand 1. | Inducible T-cell costimulator; Enhances all basic T-cell responses to a foreign antigen, namely proliferation, secretion of lymphokines, up-regulation of molecules that mediate cell-cell interaction, and effective help for antibody secretion by B-cells. Essential both for efficient interaction between T and B-cells and for normal antibody responses to T-cell dependent antigens. Does not up-regulate the production of interleukin- 2, but superinduces the synthesis of interleukin-10. Prevents the apoptosis of pre-activated T-cells. Plays a critical role in CD40- mediated class switching o [...] | 0.913 |
CD274 | IFNG | ENSBTAP00000008067 | ENSBTAP00000016634 | Programmed cell death-ligand 1. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. | 0.898 |
CD274 | LAG3 | ENSBTAP00000008067 | ENSBTAP00000066027 | Programmed cell death-ligand 1. | Lymphocyte activating 3. | 0.866 |
CD274 | PTPN6 | ENSBTAP00000008067 | ENSBTAP00000064215 | Programmed cell death-ligand 1. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.629 |
CD4 | CD274 | ENSBTAP00000037566 | ENSBTAP00000008067 | CD4 molecule. | Programmed cell death-ligand 1. | 0.943 |
CD4 | CD80 | ENSBTAP00000037566 | ENSBTAP00000070219 | CD4 molecule. | CD80 molecule. | 0.932 |
CD4 | CD86 | ENSBTAP00000037566 | ENSBTAP00000071927 | CD4 molecule. | CD86 molecule. | 0.935 |
CD4 | CTLA4 | ENSBTAP00000037566 | ENSBTAP00000017527 | CD4 molecule. | Cytotoxic T-lymphocyte-associated protein 4. | 0.932 |
CD4 | FOXP3 | ENSBTAP00000037566 | ENSBTAP00000064761 | CD4 molecule. | Forkhead box P3. | 0.948 |
CD4 | ICOS | ENSBTAP00000037566 | ENSBTAP00000028775 | CD4 molecule. | Inducible T-cell costimulator; Enhances all basic T-cell responses to a foreign antigen, namely proliferation, secretion of lymphokines, up-regulation of molecules that mediate cell-cell interaction, and effective help for antibody secretion by B-cells. Essential both for efficient interaction between T and B-cells and for normal antibody responses to T-cell dependent antigens. Does not up-regulate the production of interleukin- 2, but superinduces the synthesis of interleukin-10. Prevents the apoptosis of pre-activated T-cells. Plays a critical role in CD40- mediated class switching o [...] | 0.910 |
CD4 | ICOSLG | ENSBTAP00000037566 | ENSBTAP00000019810 | CD4 molecule. | Ig-like domain-containing protein. | 0.404 |
CD4 | IFNG | ENSBTAP00000037566 | ENSBTAP00000016634 | CD4 molecule. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. | 0.955 |
CD4 | LAG3 | ENSBTAP00000037566 | ENSBTAP00000066027 | CD4 molecule. | Lymphocyte activating 3. | 0.857 |
CD4 | PTPN6 | ENSBTAP00000037566 | ENSBTAP00000064215 | CD4 molecule. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.651 |
CD80 | CD274 | ENSBTAP00000070219 | ENSBTAP00000008067 | CD80 molecule. | Programmed cell death-ligand 1. | 0.999 |
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