Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL12A1 | COL1A1 | ENSBTAP00000026725 | ENSBTAP00000017420 | Collagen alpha-1(XII) chain. | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | 0.674 |
COL12A1 | COL1A2 | ENSBTAP00000026725 | ENSBTAP00000033771 | Collagen alpha-1(XII) chain. | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.852 |
COL12A1 | COL3A1 | ENSBTAP00000026725 | ENSBTAP00000028617 | Collagen alpha-1(XII) chain. | Collagen alpha-1(III) chain. | 0.679 |
COL12A1 | COL4A1 | ENSBTAP00000026725 | ENSBTAP00000035211 | Collagen alpha-1(XII) chain. | Collagen alpha-1(IV) chain; Type IV collagen is the major structural component of glomerular basement membranes (GBM), forming a 'chicken-wire' meshwork together with laminins, proteoglycans and entactin/nidogen. | 0.625 |
COL12A1 | COL5A1 | ENSBTAP00000026725 | ENSBTAP00000054985 | Collagen alpha-1(XII) chain. | Collagen type V alpha 1 chain. | 0.677 |
COL12A1 | COL5A2 | ENSBTAP00000026725 | ENSBTAP00000072305 | Collagen alpha-1(XII) chain. | Collagen type V alpha 2 chain. | 0.812 |
COL12A1 | COL6A1 | ENSBTAP00000026725 | ENSBTAP00000015668 | Collagen alpha-1(XII) chain. | Collagen type VI alpha 1 chain. | 0.786 |
COL12A1 | COL6A2 | ENSBTAP00000026725 | ENSBTAP00000025663 | Collagen alpha-1(XII) chain. | Collagen type VI alpha 2 chain. | 0.798 |
COL12A1 | COL6A3 | ENSBTAP00000026725 | ENSBTAP00000018479 | Collagen alpha-1(XII) chain. | Collagen type VI alpha 3 chain. | 0.798 |
COL12A1 | LUM | ENSBTAP00000026725 | ENSBTAP00000002279 | Collagen alpha-1(XII) chain. | Lumican; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class II subfamily. | 0.855 |
COL1A1 | COL12A1 | ENSBTAP00000017420 | ENSBTAP00000026725 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen alpha-1(XII) chain. | 0.674 |
COL1A1 | COL1A2 | ENSBTAP00000017420 | ENSBTAP00000033771 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.999 |
COL1A1 | COL3A1 | ENSBTAP00000017420 | ENSBTAP00000028617 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen alpha-1(III) chain. | 0.999 |
COL1A1 | COL4A1 | ENSBTAP00000017420 | ENSBTAP00000035211 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen alpha-1(IV) chain; Type IV collagen is the major structural component of glomerular basement membranes (GBM), forming a 'chicken-wire' meshwork together with laminins, proteoglycans and entactin/nidogen. | 0.670 |
COL1A1 | COL5A1 | ENSBTAP00000017420 | ENSBTAP00000054985 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type V alpha 1 chain. | 0.902 |
COL1A1 | COL5A2 | ENSBTAP00000017420 | ENSBTAP00000072305 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type V alpha 2 chain. | 0.969 |
COL1A1 | COL6A1 | ENSBTAP00000017420 | ENSBTAP00000015668 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type VI alpha 1 chain. | 0.971 |
COL1A1 | COL6A2 | ENSBTAP00000017420 | ENSBTAP00000025663 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type VI alpha 2 chain. | 0.961 |
COL1A1 | COL6A3 | ENSBTAP00000017420 | ENSBTAP00000018479 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type VI alpha 3 chain. | 0.927 |
COL1A1 | LUM | ENSBTAP00000017420 | ENSBTAP00000002279 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Lumican; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class II subfamily. | 0.942 |
page 1 of 6