Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBX2 | CBX7 | ENSBTAP00000053512 | ENSBTAP00000009507 | Chromobox 2. | Chromobox 7. | 0.851 |
CBX2 | CBX8 | ENSBTAP00000053512 | ENSBTAP00000071729 | Chromobox 2. | Chromobox 8. | 0.978 |
CBX2 | EED | ENSBTAP00000053512 | ENSBTAP00000010324 | Chromobox 2. | Polycomb protein EED; Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. Also recognizes 'Lys-26' trimethylated histone H1 with the effect of inhibiting PRC2 complex methyltransferase activity on nucleosomal histone H3 'Lys-27', whereas H3 'Lys-27' recognition has the opposite effect, enabling the propagation of this repressive mark (By similarity). The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby [...] | 0.842 |
CBX2 | KDM2B | ENSBTAP00000053512 | ENSBTAP00000003003 | Chromobox 2. | Lysine demethylase 2B. | 0.682 |
CBX2 | PCGF1 | ENSBTAP00000053512 | ENSBTAP00000022090 | Chromobox 2. | Polycomb group RING finger protein 1; Component of the Polycomb group (PcG) multiprotein BCOR complex, a complex required to maintain the transcriptionally repressive state of some genes, such as BCL6 and the cyclin-dependent kinase inhibitor, CDKN1A. Transcriptional repressor that may be targeted to the DNA by BCL6; this transcription repressor activity may be related to PKC signaling pathway. Represses CDKN1A expression by binding to its promoter, and this repression is dependent on the retinoic acid response element (RARE element). Promotes cell cycle progression and enhances cell p [...] | 0.952 |
CBX2 | RING1 | ENSBTAP00000053512 | ENSBTAP00000059635 | Chromobox 2. | Ring finger protein 1. | 0.980 |
CBX2 | RNF2 | ENSBTAP00000053512 | ENSBTAP00000000025 | Chromobox 2. | Ring finger protein 2. | 0.983 |
CBX2 | RYBP | ENSBTAP00000053512 | ENSBTAP00000056753 | Chromobox 2. | RING1 and YY1 binding protein. | 0.913 |
CBX2 | SKP1 | ENSBTAP00000053512 | ENSBTAP00000035184 | Chromobox 2. | S-phase kinase-associated protein 1; Essential component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex, which mediates the ubiquitination of proteins involved in cell cycle progression, signal transduction and transcription. In the SCF complex, serves as an adapter that links the F-box protein to CUL1. The functional specificity of the SCF complex depends on the F-box protein as substrate recognition component. SCF(BTRC) and SCF(FBXW11) direct ubiquitination of CTNNB1 and participate in Wnt signaling. SCF(FBXW11) directs ubiquitination of phosphorylated NFKBIA. SCF(BTRC [...] | 0.453 |
CBX2 | YAF2 | ENSBTAP00000053512 | ENSBTAP00000054026 | Chromobox 2. | YY1 associated factor 2. | 0.865 |
CBX7 | CBX2 | ENSBTAP00000009507 | ENSBTAP00000053512 | Chromobox 7. | Chromobox 2. | 0.851 |
CBX7 | CBX8 | ENSBTAP00000009507 | ENSBTAP00000071729 | Chromobox 7. | Chromobox 8. | 0.885 |
CBX7 | EED | ENSBTAP00000009507 | ENSBTAP00000010324 | Chromobox 7. | Polycomb protein EED; Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. Also recognizes 'Lys-26' trimethylated histone H1 with the effect of inhibiting PRC2 complex methyltransferase activity on nucleosomal histone H3 'Lys-27', whereas H3 'Lys-27' recognition has the opposite effect, enabling the propagation of this repressive mark (By similarity). The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby [...] | 0.895 |
CBX7 | KDM2B | ENSBTAP00000009507 | ENSBTAP00000003003 | Chromobox 7. | Lysine demethylase 2B. | 0.851 |
CBX7 | PCGF1 | ENSBTAP00000009507 | ENSBTAP00000022090 | Chromobox 7. | Polycomb group RING finger protein 1; Component of the Polycomb group (PcG) multiprotein BCOR complex, a complex required to maintain the transcriptionally repressive state of some genes, such as BCL6 and the cyclin-dependent kinase inhibitor, CDKN1A. Transcriptional repressor that may be targeted to the DNA by BCL6; this transcription repressor activity may be related to PKC signaling pathway. Represses CDKN1A expression by binding to its promoter, and this repression is dependent on the retinoic acid response element (RARE element). Promotes cell cycle progression and enhances cell p [...] | 0.926 |
CBX7 | RING1 | ENSBTAP00000009507 | ENSBTAP00000059635 | Chromobox 7. | Ring finger protein 1. | 0.974 |
CBX7 | RNF2 | ENSBTAP00000009507 | ENSBTAP00000000025 | Chromobox 7. | Ring finger protein 2. | 0.988 |
CBX7 | RYBP | ENSBTAP00000009507 | ENSBTAP00000056753 | Chromobox 7. | RING1 and YY1 binding protein. | 0.828 |
CBX7 | YAF2 | ENSBTAP00000009507 | ENSBTAP00000054026 | Chromobox 7. | YY1 associated factor 2. | 0.807 |
CBX8 | CBX2 | ENSBTAP00000071729 | ENSBTAP00000053512 | Chromobox 8. | Chromobox 2. | 0.978 |
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