Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MIOS | NUP107 | ENSBTAP00000018305 | ENSBTAP00000042628 | Meiosis regulator for oocyte development. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.427 |
MIOS | SEC13 | ENSBTAP00000018305 | ENSBTAP00000023702 | Meiosis regulator for oocyte development. | Protein SEC13 homolog; Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles. Required for the exit of adipsin (CFD/ADN), an adipocyte-secreted protein from the endoplasmic reticulum; Belongs to the WD repeat SEC13 family. | 0.999 |
MIOS | WDR24 | ENSBTAP00000018305 | ENSBTAP00000025300 | Meiosis regulator for oocyte development. | WD repeat domain 24. | 0.999 |
MIOS | WDR59 | ENSBTAP00000018305 | ENSBTAP00000060566 | Meiosis regulator for oocyte development. | WD repeat domain 59. | 0.999 |
NUP107 | MIOS | ENSBTAP00000042628 | ENSBTAP00000018305 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Meiosis regulator for oocyte development. | 0.427 |
NUP107 | NUP133 | ENSBTAP00000042628 | ENSBTAP00000006535 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin 133. | 0.999 |
NUP107 | NUP160 | ENSBTAP00000042628 | ENSBTAP00000028150 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin 160. | 0.999 |
NUP107 | NUP37 | ENSBTAP00000042628 | ENSBTAP00000000024 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin 37. | 0.999 |
NUP107 | NUP85 | ENSBTAP00000042628 | ENSBTAP00000034574 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein Nup85; Essential component of the nuclear pore complex (NPC) that seems to be required for NPC assembly and maintenance. As part of the NPC Nup107-160 subcomplex plays a role in RNA export and in tethering NUP96/Nup98 and NUP153 to the nucleus. The Nup107-160 complex seems to be required for spindle assembly during mitosis. NUP85 is required for membrane clustering of CCL2-activated CCR2. Seems to be involved in CCR2-mediated chemotaxis of monocytes and may link activated CCR2 to the phosphatidyl-inositol 3-kinase-Rac-lammellipodium protrusion cascade. Invo [...] | 0.999 |
NUP107 | NUP98 | ENSBTAP00000042628 | ENSBTAP00000011092 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin 98. | 0.998 |
NUP107 | SEC13 | ENSBTAP00000042628 | ENSBTAP00000023702 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Protein SEC13 homolog; Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles. Required for the exit of adipsin (CFD/ADN), an adipocyte-secreted protein from the endoplasmic reticulum; Belongs to the WD repeat SEC13 family. | 0.999 |
NUP107 | WDR24 | ENSBTAP00000042628 | ENSBTAP00000025300 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | WD repeat domain 24. | 0.634 |
NUP133 | NUP107 | ENSBTAP00000006535 | ENSBTAP00000042628 | Nucleoporin 133. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
NUP133 | NUP160 | ENSBTAP00000006535 | ENSBTAP00000028150 | Nucleoporin 133. | Nucleoporin 160. | 0.999 |
NUP133 | NUP37 | ENSBTAP00000006535 | ENSBTAP00000000024 | Nucleoporin 133. | Nucleoporin 37. | 0.999 |
NUP133 | NUP85 | ENSBTAP00000006535 | ENSBTAP00000034574 | Nucleoporin 133. | Nuclear pore complex protein Nup85; Essential component of the nuclear pore complex (NPC) that seems to be required for NPC assembly and maintenance. As part of the NPC Nup107-160 subcomplex plays a role in RNA export and in tethering NUP96/Nup98 and NUP153 to the nucleus. The Nup107-160 complex seems to be required for spindle assembly during mitosis. NUP85 is required for membrane clustering of CCL2-activated CCR2. Seems to be involved in CCR2-mediated chemotaxis of monocytes and may link activated CCR2 to the phosphatidyl-inositol 3-kinase-Rac-lammellipodium protrusion cascade. Invo [...] | 0.999 |
NUP133 | NUP98 | ENSBTAP00000006535 | ENSBTAP00000011092 | Nucleoporin 133. | Nucleoporin 98. | 0.999 |
NUP133 | SEC13 | ENSBTAP00000006535 | ENSBTAP00000023702 | Nucleoporin 133. | Protein SEC13 homolog; Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles. Required for the exit of adipsin (CFD/ADN), an adipocyte-secreted protein from the endoplasmic reticulum; Belongs to the WD repeat SEC13 family. | 0.999 |
NUP133 | WDR24 | ENSBTAP00000006535 | ENSBTAP00000025300 | Nucleoporin 133. | WD repeat domain 24. | 0.462 |
NUP133 | WDR59 | ENSBTAP00000006535 | ENSBTAP00000060566 | Nucleoporin 133. | WD repeat domain 59. | 0.486 |
page 1 of 4