STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO39F-box only protein 39; Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. (443 aa)    
Predicted Functional Partners:
RASGRF2
Ras protein specific guanine nucleotide releasing factor 2.
    
 
 0.665
GMDS
GDP-mannose 4,6-dehydratase.
      
 0.642
EDA2R
Ectodysplasin A2 receptor.
      
 0.619
PDE6B
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta; This protein participates in processes of transmission and amplification of the visual signal. Necessary for the formation of a functional phosphodiesterase holoenzyme.
      
 0.613
RALY
RNA binding protein (Autoantigenic, hnRNP-associated with lethal yellow) short isoform.
      
 0.607
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.604
ODF4
Outer dense fiber protein 4; Component of the outer dense fibers (ODF) of spermatozoa which could be involved in sperm tail structure, sperm movement and general organization of cellular cytoskeleton.
      
 0.576
TSGA10
Testis specific 10.
      
 0.569
SPATA19
Spermatogenesis-associated protein 19, mitochondrial; May have a role in spermiogenesis.
      
 0.565
OTUD5
OTU deubiquitinase 5.
      
 0.544
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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