Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGFR | ERBB2 | ENSBTAP00000070620 | ENSBTAP00000029056 | Receptor protein-tyrosine kinase. | Receptor protein-tyrosine kinase. | 0.998 |
EGFR | ERBB3 | ENSBTAP00000070620 | ENSBTAP00000013790 | Receptor protein-tyrosine kinase. | Erb-b2 receptor tyrosine kinase 3. | 0.992 |
EGFR | ERBB4 | ENSBTAP00000070620 | ENSBTAP00000071940 | Receptor protein-tyrosine kinase. | Receptor protein-tyrosine kinase. | 0.859 |
EGFR | GRB2 | ENSBTAP00000070620 | ENSBTAP00000006216 | Receptor protein-tyrosine kinase. | Growth factor receptor-bound protein 2. | 0.999 |
EGFR | IGF1R | ENSBTAP00000070620 | ENSBTAP00000028690 | Receptor protein-tyrosine kinase. | Insulin-like growth factor 1 receptor alpha chain; Receptor tyrosine kinase which mediates actions of insulin- like growth factor 1 (IGF1). Binds IGF1 with high affinity and IGF2 and insulin (INS) with a lower affinity. The activated IGF1R is involved in cell growth and survival control. IGF1R is crucial for tumor transformation and survival of malignant cell. Ligand binding activates the receptor kinase, leading to receptor autophosphorylation, and tyrosines phosphorylation of multiple substrates, that function as signaling adapter proteins including, the insulin-receptor substrates ( [...] | 0.746 |
EGFR | INSR | ENSBTAP00000070620 | ENSBTAP00000016858 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase receptor. | 0.413 |
EGFR | SHC1 | ENSBTAP00000070620 | ENSBTAP00000026432 | Receptor protein-tyrosine kinase. | SHC-transforming protein 1; Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis (By similarity). | 0.993 |
EGFR | SOS1 | ENSBTAP00000070620 | ENSBTAP00000015471 | Receptor protein-tyrosine kinase. | SOS Ras/Rac guanine nucleotide exchange factor 1. | 0.998 |
EGFR | SOS2 | ENSBTAP00000070620 | ENSBTAP00000007299 | Receptor protein-tyrosine kinase. | SOS Ras/Rho guanine nucleotide exchange factor 2. | 0.987 |
EGFR | SRC | ENSBTAP00000070620 | ENSBTAP00000011767 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase. | 0.992 |
ERBB2 | EGFR | ENSBTAP00000029056 | ENSBTAP00000070620 | Receptor protein-tyrosine kinase. | Receptor protein-tyrosine kinase. | 0.998 |
ERBB2 | ERBB3 | ENSBTAP00000029056 | ENSBTAP00000013790 | Receptor protein-tyrosine kinase. | Erb-b2 receptor tyrosine kinase 3. | 0.999 |
ERBB2 | ERBB4 | ENSBTAP00000029056 | ENSBTAP00000071940 | Receptor protein-tyrosine kinase. | Receptor protein-tyrosine kinase. | 0.994 |
ERBB2 | GRB2 | ENSBTAP00000029056 | ENSBTAP00000006216 | Receptor protein-tyrosine kinase. | Growth factor receptor-bound protein 2. | 0.991 |
ERBB2 | IGF1R | ENSBTAP00000029056 | ENSBTAP00000028690 | Receptor protein-tyrosine kinase. | Insulin-like growth factor 1 receptor alpha chain; Receptor tyrosine kinase which mediates actions of insulin- like growth factor 1 (IGF1). Binds IGF1 with high affinity and IGF2 and insulin (INS) with a lower affinity. The activated IGF1R is involved in cell growth and survival control. IGF1R is crucial for tumor transformation and survival of malignant cell. Ligand binding activates the receptor kinase, leading to receptor autophosphorylation, and tyrosines phosphorylation of multiple substrates, that function as signaling adapter proteins including, the insulin-receptor substrates ( [...] | 0.932 |
ERBB2 | INSR | ENSBTAP00000029056 | ENSBTAP00000016858 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase receptor. | 0.485 |
ERBB2 | SHC1 | ENSBTAP00000029056 | ENSBTAP00000026432 | Receptor protein-tyrosine kinase. | SHC-transforming protein 1; Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis (By similarity). | 0.972 |
ERBB2 | SOS1 | ENSBTAP00000029056 | ENSBTAP00000015471 | Receptor protein-tyrosine kinase. | SOS Ras/Rac guanine nucleotide exchange factor 1. | 0.809 |
ERBB2 | SOS2 | ENSBTAP00000029056 | ENSBTAP00000007299 | Receptor protein-tyrosine kinase. | SOS Ras/Rho guanine nucleotide exchange factor 2. | 0.504 |
ERBB2 | SRC | ENSBTAP00000029056 | ENSBTAP00000011767 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase. | 0.970 |
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