STRINGSTRING
GATA5 protein (Bos taurus) - STRING interaction network
"GATA5" - Transcription factor GATA-5 in Bos taurus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA5Transcription factor GATA-5; Transcription factor required during cardiovascular development. Plays an important role in the transcriptional program(s) that underlies smooth muscle cell diversity. Binds to the functionally important CEF-1 nuclear protein binding site in the cardiac-specific slow/cardiac troponin C transcriptional enhancer (By similarity) (403 aa)    
Predicted Functional Partners:
ZFPM2
Zinc finger protein, FOG family member 2; Belongs to the FOG (Friend of GATA) family (1004 aa)
       
  0.944
ZFPM1
Zinc finger protein, FOG family member 1; Belongs to the FOG (Friend of GATA) family (925 aa)
     
  0.939
NKX2-5
NK2 transcription factor related, locus 5 (Drosophila); Bos taurus NK2 homeobox 5 (NKX2-5), mRNA (323 aa)
     
 
  0.833
ENSBTAG00000047113
Uncharacterized protein (174 aa)
 
 
   
  0.784
TBX5
T-box 5 (519 aa)
     
 
  0.723
SOX17
SRY-box 17; Bos taurus SRY (sex determining region Y)-box 17 (SOX17), mRNA (410 aa)
     
 
  0.663
TBX20
Bos taurus T-box 20 (TBX20), mRNA (449 aa)
     
 
  0.649
NUP155
Nucleoporin 155kDa (1391 aa)
           
  0.639
PLAGL2
PLAG1 like zinc finger 2; Pleiomorphic adenoma gene-like 2 (506 aa)
       
 
  0.638
LCT
Uncharacterized protein; Bos taurus lactase (LCT), mRNA (1928 aa)
     
   
  0.633
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bos taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, domestic cattle, domestic cow
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