Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FOXA2 | MEOX1 | ENSBTAP00000016463 | ENSBTAP00000048217 | Forkhead box A2. | Mesenchyme homeobox 1. | 0.549 |
FOXA2 | MESP2 | ENSBTAP00000016463 | ENSBTAP00000038578 | Forkhead box A2. | Mesoderm posterior bHLH transcription factor 2. | 0.504 |
FOXA2 | PAX1 | ENSBTAP00000016463 | ENSBTAP00000008861 | Forkhead box A2. | Paired box 1. | 0.437 |
FOXA2 | PAX9 | ENSBTAP00000016463 | ENSBTAP00000012105 | Forkhead box A2. | Paired box 9. | 0.488 |
FOXA2 | SOX17 | ENSBTAP00000016463 | ENSBTAP00000007553 | Forkhead box A2. | SRY-box 17. | 0.904 |
FOXA2 | TBX6 | ENSBTAP00000016463 | ENSBTAP00000011919 | Forkhead box A2. | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.630 |
MEOX1 | FOXA2 | ENSBTAP00000048217 | ENSBTAP00000016463 | Mesenchyme homeobox 1. | Forkhead box A2. | 0.549 |
MEOX1 | MEOX2 | ENSBTAP00000048217 | ENSBTAP00000004198 | Mesenchyme homeobox 1. | Mesenchyme homeobox 2. | 0.638 |
MEOX1 | MESP2 | ENSBTAP00000048217 | ENSBTAP00000038578 | Mesenchyme homeobox 1. | Mesoderm posterior bHLH transcription factor 2. | 0.565 |
MEOX1 | MYF5 | ENSBTAP00000048217 | ENSBTAP00000038425 | Mesenchyme homeobox 1. | Myogenic factor 5; Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. Together with MYOG and MYOD1, co-occupies muscle-specific gene promoter core region during myogenesis. Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.567 |
MEOX1 | MYOG | ENSBTAP00000048217 | ENSBTAP00000007923 | Mesenchyme homeobox 1. | Myogenin; Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation, cell cycle exit and muscle atrophy. Essential for the development of functional embryonic skeletal fiber muscle differentiation. However is dispensable for postnatal skeletal muscle growth; phosphorylation by CAMK2G inhibits its transcriptional activity in respons to muscle activity. Required for the recruitment of the FACT complex to muscle-specific promoter regions, thus promoting gene expression initiation. During terminal myoblast dif [...] | 0.564 |
MEOX1 | PAX1 | ENSBTAP00000048217 | ENSBTAP00000008861 | Mesenchyme homeobox 1. | Paired box 1. | 0.633 |
MEOX1 | PAX9 | ENSBTAP00000048217 | ENSBTAP00000012105 | Mesenchyme homeobox 1. | Paired box 9. | 0.560 |
MEOX1 | SOX17 | ENSBTAP00000048217 | ENSBTAP00000007553 | Mesenchyme homeobox 1. | SRY-box 17. | 0.580 |
MEOX1 | TBX6 | ENSBTAP00000048217 | ENSBTAP00000011919 | Mesenchyme homeobox 1. | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.819 |
MEOX1 | TCF15 | ENSBTAP00000048217 | ENSBTAP00000007554 | Mesenchyme homeobox 1. | Transcription factor 15 (Basic helix-loop-helix). | 0.671 |
MEOX2 | MEOX1 | ENSBTAP00000004198 | ENSBTAP00000048217 | Mesenchyme homeobox 2. | Mesenchyme homeobox 1. | 0.638 |
MEOX2 | MESP2 | ENSBTAP00000004198 | ENSBTAP00000038578 | Mesenchyme homeobox 2. | Mesoderm posterior bHLH transcription factor 2. | 0.434 |
MEOX2 | MYF5 | ENSBTAP00000004198 | ENSBTAP00000038425 | Mesenchyme homeobox 2. | Myogenic factor 5; Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. Together with MYOG and MYOD1, co-occupies muscle-specific gene promoter core region during myogenesis. Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.418 |
MEOX2 | PAX1 | ENSBTAP00000004198 | ENSBTAP00000008861 | Mesenchyme homeobox 2. | Paired box 1. | 0.737 |
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