STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GIN1Gypsy retrotransposon integrase-like protein 1. (499 aa)    
Predicted Functional Partners:
SUGP2
SURP and G-patch domain containing 2.
      
 0.784
PGBD5
PiggyBac transposable element derived 5.
   
 
 0.724
THAP9
THAP domain containing 9.
   
 0.702
UBXN8
UBX domain-containing protein 8; Involved in endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins, possibly by tethering VCP to the endoplasmic reticulum membrane. May play a role in reproduction (By similarity).
      
 0.701
ZNF862
Zinc finger protein 862.
    
 0.693
ZBED8
Protein ZBED8.
   
  
 0.692
PGBD1
SCAN box domain-containing protein.
    
 0.692
POGK
Pogo transposable element derived with KRAB domain.
      
 0.666
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.634
F1MR01_BOVIN
Uncharacterized protein.
    
   0.614
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.