Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNTN1 | NRCAM | ENSBTAP00000042896 | ENSBTAP00000068074 | Contactin-1; Contactins mediate cell surface interactions during nervous system development. Involved in the formation of paranodal axo-glial junctions in myelinated peripheral nerves and in the signaling between axons and myelinating glial cells via its association with CNTNAP1. Participates in oligodendrocytes generation by acting as a ligand of NOTCH1. Its association with NOTCH1 promotes NOTCH1 activation through the released notch intracellular domain (NICD) and subsequent translocation to the nucleus. Interaction with TNR induces a repulsion of neurons and an inhibition of neurit [...] | Neuronal cell adhesion molecule. | 0.968 |
CNTN1 | PTPRG | ENSBTAP00000042896 | ENSBTAP00000054347 | Contactin-1; Contactins mediate cell surface interactions during nervous system development. Involved in the formation of paranodal axo-glial junctions in myelinated peripheral nerves and in the signaling between axons and myelinating glial cells via its association with CNTNAP1. Participates in oligodendrocytes generation by acting as a ligand of NOTCH1. Its association with NOTCH1 promotes NOTCH1 activation through the released notch intracellular domain (NICD) and subsequent translocation to the nucleus. Interaction with TNR induces a repulsion of neurons and an inhibition of neurit [...] | Protein tyrosine phosphatase receptor type G. | 0.654 |
CNTN2 | NRCAM | ENSBTAP00000019501 | ENSBTAP00000068074 | Contactin 2. | Neuronal cell adhesion molecule. | 0.685 |
CNTN2 | PTPRG | ENSBTAP00000019501 | ENSBTAP00000054347 | Contactin 2. | Protein tyrosine phosphatase receptor type G. | 0.758 |
CNTN3 | NRCAM | ENSBTAP00000010014 | ENSBTAP00000068074 | Contactin 3. | Neuronal cell adhesion molecule. | 0.482 |
CNTN3 | PTPRG | ENSBTAP00000010014 | ENSBTAP00000054347 | Contactin 3. | Protein tyrosine phosphatase receptor type G. | 0.922 |
CNTN4 | NRCAM | ENSBTAP00000053677 | ENSBTAP00000068074 | Contactin 4. | Neuronal cell adhesion molecule. | 0.497 |
CNTN4 | PTPRG | ENSBTAP00000053677 | ENSBTAP00000054347 | Contactin 4. | Protein tyrosine phosphatase receptor type G. | 0.880 |
CNTN5 | NRCAM | ENSBTAP00000027270 | ENSBTAP00000068074 | Contactin 5. | Neuronal cell adhesion molecule. | 0.705 |
CNTN5 | PTPRG | ENSBTAP00000027270 | ENSBTAP00000054347 | Contactin 5. | Protein tyrosine phosphatase receptor type G. | 0.845 |
CNTN6 | NRCAM | ENSBTAP00000004672 | ENSBTAP00000068074 | Contactin 6. | Neuronal cell adhesion molecule. | 0.478 |
CNTN6 | PTPRG | ENSBTAP00000004672 | ENSBTAP00000054347 | Contactin 6. | Protein tyrosine phosphatase receptor type G. | 0.901 |
CSPG5 | PAK1IP1 | ENSBTAP00000002979 | ENSBTAP00000024854 | Chondroitin sulfate proteoglycan 5 (Neuroglycan C). | P21-activated protein kinase-interacting protein 1; Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which has been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42. May be involved in ribosomal large subunit assembly. | 0.834 |
CSPG5 | PTPRG | ENSBTAP00000002979 | ENSBTAP00000054347 | Chondroitin sulfate proteoglycan 5 (Neuroglycan C). | Protein tyrosine phosphatase receptor type G. | 0.696 |
FAM168A | PTPRG | ENSBTAP00000073237 | ENSBTAP00000054347 | Family with sequence similarity 168 member A. | Protein tyrosine phosphatase receptor type G. | 0.626 |
NRCAM | CNTN1 | ENSBTAP00000068074 | ENSBTAP00000042896 | Neuronal cell adhesion molecule. | Contactin-1; Contactins mediate cell surface interactions during nervous system development. Involved in the formation of paranodal axo-glial junctions in myelinated peripheral nerves and in the signaling between axons and myelinating glial cells via its association with CNTNAP1. Participates in oligodendrocytes generation by acting as a ligand of NOTCH1. Its association with NOTCH1 promotes NOTCH1 activation through the released notch intracellular domain (NICD) and subsequent translocation to the nucleus. Interaction with TNR induces a repulsion of neurons and an inhibition of neurit [...] | 0.968 |
NRCAM | CNTN2 | ENSBTAP00000068074 | ENSBTAP00000019501 | Neuronal cell adhesion molecule. | Contactin 2. | 0.685 |
NRCAM | CNTN3 | ENSBTAP00000068074 | ENSBTAP00000010014 | Neuronal cell adhesion molecule. | Contactin 3. | 0.482 |
NRCAM | CNTN4 | ENSBTAP00000068074 | ENSBTAP00000053677 | Neuronal cell adhesion molecule. | Contactin 4. | 0.497 |
NRCAM | CNTN5 | ENSBTAP00000068074 | ENSBTAP00000027270 | Neuronal cell adhesion molecule. | Contactin 5. | 0.705 |
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