STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGSF6Immunoglobulin superfamily member 6. (240 aa)    
Predicted Functional Partners:
MFSD4B
Major facilitator superfamily domain containing 4B.
      
 0.713
KNOP1
Lysine-rich nucleolar protein 1.
      
 0.710
WDR38
WD repeat domain 38.
      
 0.674
FRY
FRY microtubule binding protein.
      
 0.672
TEX261
Protein TEX261.
      
 0.664
OTOA
Otoancorin.
      
 0.651
FAM133B
Uncharacterized protein.
      
 0.632
METTL9
Methyltransferase-like protein 9; Belongs to the DREV family.
      
 0.629
CLEC12A
C-type lectin domain family 12 member A.
   
  
 0.627
ADGRE3
Adhesion G protein-coupled receptor E3; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.606
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.