STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIC1Cysteine rich hydrophobic domain 1. (225 aa)    
Predicted Functional Partners:
CDX4
Caudal type homeobox 4.
 
    
 0.788
LCMT2
Leucine carboxyl methyltransferase 2.
      
 0.673
TAF9B
TATA-box binding protein associated factor 9b.
      
 0.658
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
      
 0.647
YIPF6
Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression.
      
 0.643
RPUSD2
RNA pseudouridine synthase domain containing 2.
      
 0.636
VPS9D1
VPS9 domain containing 1.
      
 0.629
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.621
WASF3
WASP family member 3.
      
 0.619
LOC785287
RNF12 protein.
      
 0.609
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.