STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIDNMidnolin. (496 aa)    
Predicted Functional Partners:
UBL7
Ubiquitin-like protein 7.
      
 0.730
UBL4A
Ubiquitin-like domain-containing protein.
      
 0.602
UNC13A
Unc-13 homolog A.
      
 0.565
USP48
Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family.
      
 0.564
SBNO2
Protein strawberry notch homolog 2; Seems to have transcriptional repression activity in macrophages.
   
  
 0.540
TSHZ3
Teashirt zinc finger homeobox 3.
      
 0.520
SEPTIN5
Septin-5; Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play a role in platelet secretion (By similarity).
   
  
 0.498
RAPGEF4
Rap guanine nucleotide exchange factor 4.
      
 0.482
ATP1B3
Sodium/potassium-transporting ATPase subunit beta-3; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known (By similarity); Belongs to the X(+)/potassium ATPases subunit beta family.
      
 0.428
DBX2
Homeobox protein DBX2.
      
 0.426
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.