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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS11ATransmembrane protease serine; Belongs to the peptidase S1 family. (417 aa)    
Predicted Functional Partners:
SERPINB11
Serpin family B member 11 (gene/pseudogene); Belongs to the serpin family.
   
 0.819
SLC13A2
Solute carrier family 13 member 2.
   
  
 0.756
SLC46A2
Solute carrier family 46 member 2.
   
  
 0.713
LRRN4CL
LRRN4 C-terminal like.
      
 0.710
SAPCD2
Suppressor APC domain containing 2.
      
 0.705
PDCL2
Phosducin like 2.
      
 0.691
IGSF9B
Immunoglobulin superfamily member 9B.
    
 0.689
TMEM45B
Transmembrane protein 45B.
      
 0.676
SLC44A3
Solute carrier family 44 member 3; Belongs to the CTL (choline transporter-like) family.
   
  
 0.662
SLC44A4
Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family.
   
  
 0.651
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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