NVL protein (Capra hircus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

NVL

Nuclear VCP like. (860 aa)

Predicted Functional Partners:

MTREX

0.963

WDR74

0.938

RPF2

0.908

POLR1A

0.901

RBM28

0.878

DDX56

0.863

PES1

0.860

NIFK

0.859

UTP14A

0.857

NOC3L

0.857

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX56	MTREX	ENSCHIP00000012553	ENSCHIP00000029280	DEAD-box helicase 56.	Mtr4 exosome RNA helicase.	0.797
DDX56	NIFK	ENSCHIP00000012553	ENSCHIP00000006791	DEAD-box helicase 56.	Nucleolar protein interacting with the FHA domain of MKI67.	0.919
DDX56	NOC3L	ENSCHIP00000012553	ENSCHIP00000028512	DEAD-box helicase 56.	Nucleolar complex protein 3 homolog.	0.802
DDX56	NVL	ENSCHIP00000012553	ENSCHIP00000001006	DEAD-box helicase 56.	Nuclear VCP like.	0.863
DDX56	PES1	ENSCHIP00000012553	ENSCHIP00000014971	DEAD-box helicase 56.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.	0.962
DDX56	POLR1A	ENSCHIP00000012553	ENSCHIP00000019133	DEAD-box helicase 56.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.686
DDX56	RBM28	ENSCHIP00000012553	ENSCHIP00000012345	DEAD-box helicase 56.	RNA binding motif protein 28.	0.962
DDX56	RPF2	ENSCHIP00000012553	ENSCHIP00000025945	DEAD-box helicase 56.	Ribosome production factor 2 homolog.	0.976
DDX56	UTP14A	ENSCHIP00000012553	ENSCHIP00000006487	DEAD-box helicase 56.	Uncharacterized protein.	0.846
DDX56	WDR74	ENSCHIP00000012553	ENSCHIP00000026397	DEAD-box helicase 56.	WD repeat domain 74.	0.970
MTREX	DDX56	ENSCHIP00000029280	ENSCHIP00000012553	Mtr4 exosome RNA helicase.	DEAD-box helicase 56.	0.797
MTREX	NIFK	ENSCHIP00000029280	ENSCHIP00000006791	Mtr4 exosome RNA helicase.	Nucleolar protein interacting with the FHA domain of MKI67.	0.829
MTREX	NOC3L	ENSCHIP00000029280	ENSCHIP00000028512	Mtr4 exosome RNA helicase.	Nucleolar complex protein 3 homolog.	0.820
MTREX	NVL	ENSCHIP00000029280	ENSCHIP00000001006	Mtr4 exosome RNA helicase.	Nuclear VCP like.	0.963
MTREX	PES1	ENSCHIP00000029280	ENSCHIP00000014971	Mtr4 exosome RNA helicase.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.	0.840
MTREX	POLR1A	ENSCHIP00000029280	ENSCHIP00000019133	Mtr4 exosome RNA helicase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.858
MTREX	RBM28	ENSCHIP00000029280	ENSCHIP00000012345	Mtr4 exosome RNA helicase.	RNA binding motif protein 28.	0.739
MTREX	RPF2	ENSCHIP00000029280	ENSCHIP00000025945	Mtr4 exosome RNA helicase.	Ribosome production factor 2 homolog.	0.925
MTREX	UTP14A	ENSCHIP00000029280	ENSCHIP00000006487	Mtr4 exosome RNA helicase.	Uncharacterized protein.	0.890
MTREX	WDR74	ENSCHIP00000029280	ENSCHIP00000026397	Mtr4 exosome RNA helicase.	WD repeat domain 74.	0.636