Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM41Tripartite motif containing 41. (629 aa)    
Predicted Functional Partners:
ENSCHIP00000001239
Olfactory receptor.
      
 0.785
LOC108636448
Olfactory receptor.
      
 0.785
TRIM32
Tripartite motif containing 32.
    
 0.776
TRIM66
Tripartite motif containing 66.
      
 0.755
TRIM42
Tripartite motif containing 42.
    
 
 0.727
TRIM56
Tripartite motif containing 56.
      
 0.706
TRIM23
Tripartite motif containing 23.
    
 0.688
TRIM44
Tripartite motif containing 44.
    
 
 0.662
ENSCHIP00000005793
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.657
LOC102191414
Olfactory receptor.
      
 0.657
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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