Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102184922VLIG-type G domain-containing protein. (2322 aa)    
Predicted Functional Partners:
NET1
Neuroepithelial cell transforming 1.
    
 0.481
ARHGEF3
Uncharacterized protein.
    
 0.481
ENSCHIP00000021361
Uncharacterized protein.
    
 0.481
DDX20
DEAD-box helicase 20.
   
 0.465
FANCM
FA complementation group M.
    
 0.462
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.428
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.426
POLD1
DNA polymerase.
    
 0.402
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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